Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468368: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320674' containing sample 'ABC020046158'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.9M spots, 785.1M bases, 335.4Mb downloads

UUID: 15d96677-ecae-4ab7-8567-7ff28067d8a6

Design: Illumina sequencing of Streptococcus pyogenes ABC020046158 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA232994 • SRP037356 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020046158

SAMN02567343 • SRS555794 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020046158

Library:

Name: Pond-320674

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 474147.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVXA

material_type: DNA:DNA Somatic

product_order: PDO-2720

product_part_number: P-MCV-0001

project: G56945

research_project: RP-560

root_sample_id: SM-4P3MH

sample_id: SM-5CVXA

work_request: 39854

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.9M spots, 785.1M bases, 335.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1166041	1,945,209	392.9M	167.8Mb	2014-02-09
SRR1166254	1,941,660	392.2M	167.6Mb	2014-02-10

ID:: 648556

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